Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm24687-201ENSMUST00000157758 241 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm11107-201ENSMUST00000165414 505 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm20702-201ENSMUST00000176181 460 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm6055-201ENSMUST00000180532 378 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm26784-201ENSMUST00000181666 410 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm27507-201ENSMUST00000184199 93 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm27210-201ENSMUST00000184263 402 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.99□□□□□ -1.45
Col8a1Q00780 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm8667-201ENSMUST00000211112 449 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC5.99□□□□□ -1.45
Col8a1Q00780 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm19134-201ENSMUST00000221203 487 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.99□□□□□ -1.45
Col8a1Q00780 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm6575-201ENSMUST00000222946 697 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.99□□□□□ -1.45
Col8a1Q00780 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 AC137902.2-201ENSMUST00000227989 576 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Olfr519-201ENSMUST00000084752 960 ntBASIC5.99□□□□□ -1.45
Col8a1Q00780 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col8a1Q00780 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col8a1Q00780 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm43279-201ENSMUST00000202376 2512 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm43196-201ENSMUST00000201762 2114 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 AC135083.2-201ENSMUST00000228599 1456 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm21152-201ENSMUST00000190271 3483 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm25313-201ENSMUST00000101817 116 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm23311-201ENSMUST00000104152 134 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm6429-201ENSMUST00000117144 475 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm6181-201ENSMUST00000117187 264 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm9432-201ENSMUST00000117810 759 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm11359-201ENSMUST00000120039 567 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm22793-201ENSMUST00000157227 330 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm24286-201ENSMUST00000157632 128 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm6650-201ENSMUST00000166710 614 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Atp2b4-208ENSMUST00000167348 243 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm2930-201ENSMUST00000170403 474 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm24756-201ENSMUST00000177002 96 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm18006-201ENSMUST00000177411 662 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm23287-201ENSMUST00000179427 116 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm23143-201ENSMUST00000180137 116 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm19649-201ENSMUST00000201126 822 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm4374-201ENSMUST00000204929 424 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC5.98□□□□□ -1.45
Col8a1Q00780 AC115047.1-201ENSMUST00000213795 322 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.98□□□□□ -1.45
Col8a1Q00780 CT573422.1-201ENSMUST00000216655 405 ntBASIC5.98□□□□□ -1.45
Col8a1Q00780 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col8a1Q00780 AC123920.1-201ENSMUST00000221449 384 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms