Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
PrkdcP97313 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PrkdcP97313 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PrkdcP97313 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PrkdcP97313 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Kidins220-202ENSMUST00000220459 5381 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PrkdcP97313 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PrkdcP97313 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Gm46327-201ENSMUST00000218240 365 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 AC154527.1-201ENSMUST00000225809 242 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Gm23238-201ENSMUST00000083007 164 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Gm42702-201ENSMUST00000199515 4217 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
PrkdcP97313 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PrkdcP97313 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Gm39041-201ENSMUST00000205557 3902 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.05□□□□□ -1.76
PrkdcP97313 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Gm18150-201ENSMUST00000195341 645 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.05□□□□□ -1.76
PrkdcP97313 Gm18468-201ENSMUST00000207321 369 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Gm18470-201ENSMUST00000207467 420 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Gm18465-201ENSMUST00000207468 369 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Gm18464-201ENSMUST00000207803 420 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Gm18458-201ENSMUST00000207908 369 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Gm18461-201ENSMUST00000208421 420 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.05□□□□□ -1.76
PrkdcP97313 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Gm2099-201ENSMUST00000220979 412 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 AC158954.1-201ENSMUST00000228272 1006 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC4.05□□□□□ -1.76
PrkdcP97313 4933427D14Rik-202ENSMUST00000108506 4732 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Gm15903-202ENSMUST00000199631 3518 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PrkdcP97313 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Gm23534-201ENSMUST00000157539 97 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Gm22094-201ENSMUST00000158976 117 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Gm20056-201ENSMUST00000194813 519 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Gm29778-201ENSMUST00000201667 466 ntBASIC4.05□□□□□ -1.76
PrkdcP97313 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
PrkdcP97313 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PrkdcP97313 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PrkdcP97313 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 AC122881.1-201ENSMUST00000225757 2695 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm15803-201ENSMUST00000120118 394 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Gm6061-201ENSMUST00000175860 492 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC4.04□□□□□ -1.76
PrkdcP97313 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC4.04□□□□□ -1.76
PrkdcP97313 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Slc39a9-201ENSMUST00000085245 5201 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC4.04□□□□□ -1.76
PrkdcP97313 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PrkdcP97313 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms