Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CiitaP79621 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.76□□□□□ -1.33
CiitaP79621 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.76□□□□□ -1.33
CiitaP79621 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CiitaP79621 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.76□□□□□ -1.33
CiitaP79621 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CiitaP79621 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CiitaP79621 Gm23440-201ENSMUST00000104299 130 ntBASIC6.76□□□□□ -1.33
CiitaP79621 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CiitaP79621 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Gm14098-201ENSMUST00000119295 623 ntBASIC6.76□□□□□ -1.33
CiitaP79621 Gm6461-201ENSMUST00000120015 633 ntBASIC6.76□□□□□ -1.33
CiitaP79621 Gm14712-201ENSMUST00000120195 772 ntBASIC6.76□□□□□ -1.33
CiitaP79621 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CiitaP79621 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.76□□□□□ -1.33
CiitaP79621 Gm37966-201ENSMUST00000193122 326 ntBASIC6.76□□□□□ -1.33
CiitaP79621 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.76□□□□□ -1.33
CiitaP79621 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.76□□□□□ -1.33
CiitaP79621 Gm44837-201ENSMUST00000206863 717 ntBASIC6.76□□□□□ -1.33
CiitaP79621 Gm8863-201ENSMUST00000216630 926 ntBASIC6.76□□□□□ -1.33
CiitaP79621 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.76□□□□□ -1.33
CiitaP79621 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.76□□□□□ -1.33
CiitaP79621 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.76□□□□□ -1.33
CiitaP79621 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.76□□□□□ -1.33
CiitaP79621 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CiitaP79621 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.76□□□□□ -1.33
CiitaP79621 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.76□□□□□ -1.33
CiitaP79621 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CiitaP79621 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CiitaP79621 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.76□□□□□ -1.33
CiitaP79621 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
CiitaP79621 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CiitaP79621 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.76□□□□□ -1.33
CiitaP79621 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.76□□□□□ -1.33
CiitaP79621 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.75□□□□□ -1.33
CiitaP79621 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.75□□□□□ -1.33
CiitaP79621 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CiitaP79621 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.75□□□□□ -1.33
CiitaP79621 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
CiitaP79621 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.75□□□□□ -1.33
CiitaP79621 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.75□□□□□ -1.33
CiitaP79621 Gm22636-201ENSMUST00000158142 275 ntBASIC6.75□□□□□ -1.33
CiitaP79621 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.75□□□□□ -1.33
CiitaP79621 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CiitaP79621 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Gm44360-201ENSMUST00000200081 82 ntBASIC6.75□□□□□ -1.33
CiitaP79621 Gm44312-201ENSMUST00000203536 469 ntBASIC6.75□□□□□ -1.33
CiitaP79621 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Gm18467-201ENSMUST00000208805 434 ntBASIC6.75□□□□□ -1.33
CiitaP79621 Gm7499-201ENSMUST00000210423 813 ntBASIC6.75□□□□□ -1.33
CiitaP79621 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.75□□□□□ -1.33
CiitaP79621 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.75□□□□□ -1.33
CiitaP79621 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.75□□□□□ -1.33
CiitaP79621 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.75□□□□□ -1.33
CiitaP79621 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Gm24454-201ENSMUST00000083349 132 ntBASIC6.75□□□□□ -1.33
CiitaP79621 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CiitaP79621 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.75□□□□□ -1.33
CiitaP79621 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CiitaP79621 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.75□□□□□ -1.33
CiitaP79621 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.75□□□□□ -1.33
CiitaP79621 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
CiitaP79621 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.75□□□□□ -1.33
CiitaP79621 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CiitaP79621 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CiitaP79621 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CiitaP79621 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.74□□□□□ -1.33
CiitaP79621 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CiitaP79621 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CiitaP79621 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CiitaP79621 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.74□□□□□ -1.33
CiitaP79621 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CiitaP79621 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms