Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Shmt1P50431 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Shmt1P50431 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.8□□□□□ -1.32
Shmt1P50431 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Shmt1P50431 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Shmt1P50431 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Shmt1P50431 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.8□□□□□ -1.32
Shmt1P50431 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.79□□□□□ -1.32
Shmt1P50431 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Shmt1P50431 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm8692-201ENSMUST00000118102 438 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Gm12937-201ENSMUST00000118333 448 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Gm16511-201ENSMUST00000120019 564 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm23894-201ENSMUST00000158107 313 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Gm26607-201ENSMUST00000180661 867 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm18984-201ENSMUST00000193998 1124 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm5694-201ENSMUST00000195648 641 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm42454-201ENSMUST00000196805 1181 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Gm8454-201ENSMUST00000196980 811 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Gm42593-201ENSMUST00000198469 377 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Gm43850-201ENSMUST00000202021 578 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC6.79□□□□□ -1.32
Shmt1P50431 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Gm9535-201ENSMUST00000218499 768 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 AC165437.1-201ENSMUST00000228640 536 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm28392-201ENSMUST00000077630 393 ntBASIC6.79□□□□□ -1.32
Shmt1P50431 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Shmt1P50431 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms