Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm13501-201ENSMUST00000118477 979 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm14930-201ENSMUST00000118864 652 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm12727-201ENSMUST00000119885 359 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm15362-201ENSMUST00000121459 388 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm15227-201ENSMUST00000121844 399 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Rfx1P48377 Gm4764-201ENSMUST00000130207 1233 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.1□□□□□ -1.11
Rfx1P48377 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.1□□□□□ -1.11
Rfx1P48377 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC8.1□□□□□ -1.11
Rfx1P48377 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 Gm24782-201ENSMUST00000157641 132 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm17217-201ENSMUST00000166613 469 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm27942-201ENSMUST00000184669 101 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm4412-201ENSMUST00000186660 433 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm18349-201ENSMUST00000187440 904 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm28546-201ENSMUST00000188221 615 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm21803-201ENSMUST00000188897 693 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm28648-201ENSMUST00000190092 343 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm28567-201ENSMUST00000190270 693 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm37044-201ENSMUST00000193531 693 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm38369-201ENSMUST00000195101 693 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.1□□□□□ -1.11
Rfx1P48377 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC8.1□□□□□ -1.11
Rfx1P48377 Gm42887-201ENSMUST00000202469 1119 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 AC153957.1-201ENSMUST00000215235 229 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm19174-201ENSMUST00000216944 956 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 AC154734.1-201ENSMUST00000219957 2141 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 AC107453.3-201ENSMUST00000228205 639 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Rfx1P48377 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Rfx1P48377 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.1□□□□□ -1.11
Rfx1P48377 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Rfx1P48377 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Rfx1P48377 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 Gm42940-201ENSMUST00000200361 2362 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC8.1□□□□□ -1.11
Rfx1P48377 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm37877-201ENSMUST00000191630 2709 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Rfx1P48377 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm44046-201ENSMUST00000203145 2678 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm14245-201ENSMUST00000118939 1843 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Gm25614-201ENSMUST00000104013 133 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Gm15778-201ENSMUST00000118469 608 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Gm4342-201ENSMUST00000118982 367 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Gm8916-201ENSMUST00000119732 949 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm7393-201ENSMUST00000172650 739 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Gm9274-201ENSMUST00000182505 984 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Mir7084-201ENSMUST00000183876 70 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.09□□□□□ -1.11
Rfx1P48377 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm36378-201ENSMUST00000201709 388 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Gm19617-201ENSMUST00000202977 308 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Gm44111-201ENSMUST00000204649 399 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Gm44258-201ENSMUST00000204925 301 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Gm45198-201ENSMUST00000206796 591 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Gm8264-201ENSMUST00000217801 465 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC8.09□□□□□ -1.11
Rfx1P48377 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Gm7119-201ENSMUST00000221345 695 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Rfx1P48377 CT025630.2-201ENSMUST00000228293 487 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 CT025525.3-201ENSMUST00000228858 366 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm4822-201ENSMUST00000077551 479 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Rfx1P48377 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Rfx1P48377 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Rfx1P48377 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC8.09□□□□□ -1.11
Rfx1P48377 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rfx1P48377 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC8.09□□□□□ -1.11
Rfx1P48377 Gm37183-201ENSMUST00000191712 3405 ntBASIC8.09□□□□□ -1.12
Rfx1P48377 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rfx1P48377 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms