Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm26162-201ENSMUST00000157793 132 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 Mir1945-201ENSMUST00000157919 78 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm24081-201ENSMUST00000175177 125 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm28973-201ENSMUST00000189310 613 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm43743-202ENSMUST00000198353 491 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm44108-201ENSMUST00000203525 422 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm45628-201ENSMUST00000210849 274 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm8501-201ENSMUST00000117684 432 ntBASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm7746-201ENSMUST00000120966 503 ntBASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm2986-201ENSMUST00000121603 382 ntBASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm15840-201ENSMUST00000122099 943 ntBASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm11107-201ENSMUST00000165414 505 ntBASIC5.79□□□□□ -1.48
Tnfsf4P43488 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Ighv1-21-201ENSMUST00000194856 351 ntBASIC5.79□□□□□ -1.48
Tnfsf4P43488 AC151967.1-201ENSMUST00000198146 76 ntBASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm29486-201ENSMUST00000088648 372 ntBASIC5.79□□□□□ -1.48
Tnfsf4P43488 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.79□□□□□ -1.48
Tnfsf4P43488 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.79□□□□□ -1.48
Tnfsf4P43488 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.79□□□□□ -1.48
Tnfsf4P43488 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Tnfsf4P43488 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm25877-201ENSMUST00000104326 129 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm25346-201ENSMUST00000104509 128 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Snora47-201ENSMUST00000157483 138 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm20480-201ENSMUST00000173953 250 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm9556-201ENSMUST00000182938 940 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Mir7005-201ENSMUST00000185089 69 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm7804-202ENSMUST00000194187 854 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm43467-201ENSMUST00000197441 437 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm29736-201ENSMUST00000198189 385 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm8863-201ENSMUST00000216630 926 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms