Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC121986.1-201ENSMUST00000218588 781 ntBASIC6.24□□□□□ -1.41
HttP42859 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.24□□□□□ -1.41
HttP42859 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HttP42859 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HttP42859 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.24□□□□□ -1.41
HttP42859 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HttP42859 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.24□□□□□ -1.41
HttP42859 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Gm23327-201ENSMUST00000157420 78 ntBASIC6.24□□□□□ -1.41
HttP42859 Gm5946-201ENSMUST00000182340 970 ntBASIC6.24□□□□□ -1.41
HttP42859 Mir6410-201ENSMUST00000184204 104 ntBASIC6.24□□□□□ -1.41
HttP42859 AC134860.6-201ENSMUST00000226038 285 ntBASIC6.24□□□□□ -1.41
HttP42859 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.24□□□□□ -1.41
HttP42859 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HttP42859 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HttP42859 Gm23238-201ENSMUST00000083007 164 ntBASIC6.24□□□□□ -1.41
HttP42859 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.24□□□□□ -1.41
HttP42859 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
HttP42859 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HttP42859 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HttP42859 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.24□□□□□ -1.41
HttP42859 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
HttP42859 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HttP42859 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.23□□□□□ -1.41
HttP42859 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Gm7363-201ENSMUST00000119883 399 ntBASIC6.23□□□□□ -1.41
HttP42859 Gm27541-201ENSMUST00000184078 122 ntBASIC6.23□□□□□ -1.41
HttP42859 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HttP42859 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.23□□□□□ -1.41
HttP42859 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.23□□□□□ -1.41
HttP42859 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HttP42859 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.23□□□□□ -1.41
HttP42859 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.23□□□□□ -1.41
HttP42859 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.23□□□□□ -1.41
HttP42859 Mir346-201ENSMUST00000083547 98 ntBASIC6.23□□□□□ -1.41
HttP42859 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HttP42859 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HttP42859 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HttP42859 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HttP42859 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HttP42859 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.23□□□□□ -1.41
HttP42859 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HttP42859 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
HttP42859 Gm14908-201ENSMUST00000120930 1286 ntBASIC6.23□□□□□ -1.41
HttP42859 Gm24905-201ENSMUST00000158129 104 ntBASIC6.23□□□□□ -1.41
HttP42859 Gm26357-201ENSMUST00000158218 115 ntBASIC6.23□□□□□ -1.41
HttP42859 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.23□□□□□ -1.41
HttP42859 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC6.23□□□□□ -1.41
HttP42859 Gm4874-201ENSMUST00000203589 691 ntBASIC6.23□□□□□ -1.41
HttP42859 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.23□□□□□ -1.41
HttP42859 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HttP42859 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.23□□□□□ -1.41
HttP42859 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HttP42859 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HttP42859 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.22□□□□□ -1.41
HttP42859 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HttP42859 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HttP42859 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms