Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm23884-201ENSMUST00000122687 294 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.77□□□□□ -1.49
Sox6P40645 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.77□□□□□ -1.49
Sox6P40645 Gm26167-201ENSMUST00000158423 253 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Gm24682-201ENSMUST00000158764 137 ntBASIC5.77□□□□□ -1.49
Sox6P40645 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.77□□□□□ -1.49
Sox6P40645 Gm5283-201ENSMUST00000177874 334 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Sox6P40645 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Gm5050-201ENSMUST00000197164 775 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.77□□□□□ -1.49
Sox6P40645 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Gm6850-201ENSMUST00000210031 530 ntBASIC5.77□□□□□ -1.49
Sox6P40645 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.77□□□□□ -1.49
Sox6P40645 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.77□□□□□ -1.49
Sox6P40645 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Sox6P40645 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Sox6P40645 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Phxr4-202ENSMUST00000216590 1391 ntBASIC5.77□□□□□ -1.49
Sox6P40645 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox6P40645 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox6P40645 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.77□□□□□ -1.49
Sox6P40645 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.77□□□□□ -1.49
Sox6P40645 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox6P40645 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox6P40645 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox6P40645 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox6P40645 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sox6P40645 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.76□□□□□ -1.49
Sox6P40645 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Sox6P40645 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sox6P40645 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sox6P40645 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sox6P40645 Gm22284-201ENSMUST00000104132 132 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Gm24989-201ENSMUST00000104461 88 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.76□□□□□ -1.49
Sox6P40645 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox6P40645 Gm13768-201ENSMUST00000116469 929 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Gm8089-201ENSMUST00000122463 968 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Gm22276-201ENSMUST00000122469 129 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sox6P40645 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.76□□□□□ -1.49
Sox6P40645 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.76□□□□□ -1.49
Sox6P40645 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.76□□□□□ -1.49
Sox6P40645 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.76□□□□□ -1.49
Sox6P40645 Gm26037-201ENSMUST00000158150 311 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox6P40645 Gm28455-201ENSMUST00000189105 1290 ntBASIC5.76□□□□□ -1.49
Sox6P40645 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox6P40645 Gm8009-201ENSMUST00000191672 436 ntBASIC5.76□□□□□ -1.49
Sox6P40645 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Gm42708-201ENSMUST00000196332 905 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Gm43849-201ENSMUST00000201086 215 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC5.76□□□□□ -1.49
Sox6P40645 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC5.76□□□□□ -1.49
Sox6P40645 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.76□□□□□ -1.49
Sox6P40645 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.76□□□□□ -1.49
Sox6P40645 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.76□□□□□ -1.49
Sox6P40645 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox6P40645 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sox6P40645 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sox6P40645 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sox6P40645 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sox6P40645 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox6P40645 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox6P40645 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
Sox6P40645 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.76□□□□□ -1.49
Sox6P40645 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox6P40645 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.76□□□□□ -1.49
Sox6P40645 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.76□□□□□ -1.49
Sox6P40645 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.76□□□□□ -1.49
Sox6P40645 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
Sox6P40645 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sox6P40645 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms