Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Traf1P39428 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Traf1P39428 AC174459.1-201ENSMUST00000224476 1943 ntBASIC7.29□□□□□ -1.24
Traf1P39428 AC114585.1-201ENSMUST00000228080 3680 ntBASIC7.29□□□□□ -1.24
Traf1P39428 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC7.28□□□□□ -1.24
Traf1P39428 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Traf1P39428 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Traf1P39428 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Traf1P39428 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Traf1P39428 Gm8855-201ENSMUST00000118888 878 ntBASIC7.28□□□□□ -1.24
Traf1P39428 Gm13604-201ENSMUST00000119332 482 ntBASIC7.28□□□□□ -1.24
Traf1P39428 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC7.28□□□□□ -1.24
Traf1P39428 Gm24343-201ENSMUST00000158708 111 ntBASIC7.28□□□□□ -1.24
Traf1P39428 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 Gm28186-201ENSMUST00000187447 679 ntBASIC7.28□□□□□ -1.24
Traf1P39428 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.28□□□□□ -1.24
Traf1P39428 Ighv5-3-201ENSMUST00000195336 322 ntBASIC7.28□□□□□ -1.24
Traf1P39428 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7.28□□□□□ -1.24
Traf1P39428 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC7.28□□□□□ -1.24
Traf1P39428 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Traf1P39428 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.28□□□□□ -1.24
Traf1P39428 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC7.28□□□□□ -1.24
Traf1P39428 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC7.28□□□□□ -1.24
Traf1P39428 AC073947.1-201ENSMUST00000216991 649 ntBASIC7.28□□□□□ -1.24
Traf1P39428 AC122371.2-201ENSMUST00000220583 366 ntBASIC7.28□□□□□ -1.24
Traf1P39428 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.28□□□□□ -1.24
Traf1P39428 AC154634.2-201ENSMUST00000225983 1184 ntBASIC7.28□□□□□ -1.24
Traf1P39428 AC133283.1-201ENSMUST00000228443 859 ntBASIC7.28□□□□□ -1.24
Traf1P39428 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Traf1P39428 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.28□□□□□ -1.24
Traf1P39428 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Traf1P39428 Gm45117-201ENSMUST00000207250 1774 ntBASIC7.28□□□□□ -1.24
Traf1P39428 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
Traf1P39428 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Traf1P39428 Gm42507-201ENSMUST00000201187 2555 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
Traf1P39428 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Traf1P39428 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Traf1P39428 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC7.27□□□□□ -1.25
Traf1P39428 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Traf1P39428 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Traf1P39428 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Traf1P39428 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Traf1P39428 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Traf1P39428 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Traf1P39428 Gm22371-201ENSMUST00000104588 130 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.27□□□□□ -1.25
Traf1P39428 Gm22714-201ENSMUST00000116894 78 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Gm12874-201ENSMUST00000117190 913 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Gm11821-201ENSMUST00000117335 979 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Gm14755-201ENSMUST00000118037 384 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Gm8317-201ENSMUST00000121261 471 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC7.27□□□□□ -1.25
Traf1P39428 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.27□□□□□ -1.25
Traf1P39428 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC7.27□□□□□ -1.25
Traf1P39428 Gm20778-201ENSMUST00000178524 627 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Traf1P39428 Gm21139-201ENSMUST00000186594 877 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Gm8860-201ENSMUST00000193160 445 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Gm18009-201ENSMUST00000203239 1016 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Gm45485-201ENSMUST00000211229 357 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.27□□□□□ -1.25
Traf1P39428 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Gm9292-201ENSMUST00000222008 710 ntBASIC7.27□□□□□ -1.25
Traf1P39428 AC163631.1-201ENSMUST00000225041 598 ntBASIC7.27□□□□□ -1.25
Traf1P39428 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Gm22126-201ENSMUST00000083244 142 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Traf1P39428 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Traf1P39428 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Traf1P39428 Gm42975-201ENSMUST00000200612 1491 ntBASIC7.27□□□□□ -1.25
Traf1P39428 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Traf1P39428 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
Traf1P39428 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Traf1P39428 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Traf1P39428 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Traf1P39428 AC163032.1-201ENSMUST00000220671 2970 ntBASIC7.26□□□□□ -1.25
Traf1P39428 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Traf1P39428 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Traf1P39428 Gm4991-201ENSMUST00000118899 1552 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms