Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm25564-201ENSMUST00000104604 132 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm11271-201ENSMUST00000116054 440 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm13156-201ENSMUST00000118348 321 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm11472-201ENSMUST00000121305 556 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm12369-201ENSMUST00000121343 942 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.6□□□□□ -1.51
Hoxc5P32043 Mir1953-201ENSMUST00000157866 89 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Hoxc5P32043 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.6□□□□□ -1.51
Hoxc5P32043 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm29464-201ENSMUST00000187692 513 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm38030-201ENSMUST00000192376 475 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.6□□□□□ -1.51
Hoxc5P32043 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm36378-201ENSMUST00000201709 388 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm44279-201ENSMUST00000205154 472 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.6□□□□□ -1.51
Hoxc5P32043 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxc5P32043 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.6□□□□□ -1.51
Hoxc5P32043 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Hoxc5P32043 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.6□□□□□ -1.51
Hoxc5P32043 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxc5P32043 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Hoxc5P32043 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxc5P32043 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxc5P32043 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.6□□□□□ -1.51
Hoxc5P32043 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm25374-201ENSMUST00000158158 101 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm25989-201ENSMUST00000158761 133 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm16269-201ENSMUST00000160532 409 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm16297-201ENSMUST00000161466 459 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm5947-201ENSMUST00000179156 714 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm5645-201ENSMUST00000179597 714 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm5430-201ENSMUST00000182525 915 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm8367-201ENSMUST00000186145 887 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm29551-201ENSMUST00000190913 698 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm17934-201ENSMUST00000192818 422 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm43849-201ENSMUST00000201086 215 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm45628-201ENSMUST00000210849 274 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxc5P32043 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxc5P32043 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 AC101205.1-201ENSMUST00000227916 907 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm22581-201ENSMUST00000083735 136 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Hoxc5P32043 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxc5P32043 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.59□□□□□ -1.51
Hoxc5P32043 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.59□□□□□ -1.52
Hoxc5P32043 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.59□□□□□ -1.52
Hoxc5P32043 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.59□□□□□ -1.52
Hoxc5P32043 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Gm43523-201ENSMUST00000197397 2878 ntBASIC5.58□□□□□ -1.52
Hoxc5P32043 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxc5P32043 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Hoxc5P32043 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms