Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.47□□□□□ -1.53
P20040 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.47□□□□□ -1.53
P20040 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
P20040 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
P20040 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
P20040 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
P20040 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.47□□□□□ -1.53
P20040 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.47□□□□□ -1.53
P20040 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
P20040 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.47□□□□□ -1.53
P20040 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.47□□□□□ -1.53
P20040 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.47□□□□□ -1.53
P20040 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
P20040 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.47□□□□□ -1.53
P20040 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.47□□□□□ -1.53
P20040 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.47□□□□□ -1.53
P20040 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
P20040 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
P20040 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
P20040 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
P20040 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
P20040 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.46□□□□□ -1.53
P20040 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.46□□□□□ -1.53
P20040 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.53
P20040 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
P20040 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.53
P20040 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.53
P20040 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.46□□□□□ -1.54
P20040 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Mir290a-201ENSMUST00000104627 83 ntBASIC5.46□□□□□ -1.54
P20040 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.46□□□□□ -1.54
P20040 Gm9506-201ENSMUST00000118516 320 ntBASIC5.46□□□□□ -1.54
P20040 Gm7058-201ENSMUST00000119209 902 ntBASIC5.46□□□□□ -1.54
P20040 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.46□□□□□ -1.54
P20040 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Gm26037-201ENSMUST00000158150 311 ntBASIC5.46□□□□□ -1.54
P20040 Gm25374-201ENSMUST00000158158 101 ntBASIC5.46□□□□□ -1.54
P20040 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.46□□□□□ -1.54
P20040 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.46□□□□□ -1.54
P20040 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
P20040 Gm18833-201ENSMUST00000173218 862 ntBASIC5.46□□□□□ -1.54
P20040 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
P20040 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
P20040 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.46□□□□□ -1.54
P20040 Gm37189-201ENSMUST00000192131 298 ntBASIC5.46□□□□□ -1.54
P20040 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
P20040 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.46□□□□□ -1.54
P20040 Gm42799-201ENSMUST00000201331 328 ntBASIC5.46□□□□□ -1.54
P20040 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.46□□□□□ -1.54
P20040 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.46□□□□□ -1.54
P20040 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.46□□□□□ -1.54
P20040 Gm17994-201ENSMUST00000209260 533 ntBASIC5.46□□□□□ -1.54
P20040 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.46□□□□□ -1.54
P20040 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.46□□□□□ -1.54
P20040 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.46□□□□□ -1.54
P20040 Gm19340-201ENSMUST00000221995 345 ntBASIC5.46□□□□□ -1.54
P20040 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.46□□□□□ -1.54
P20040 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
P20040 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.46□□□□□ -1.54
P20040 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
P20040 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
P20040 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.46□□□□□ -1.54
P20040 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.46□□□□□ -1.54
P20040 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
P20040 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.46□□□□□ -1.54
P20040 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
P20040 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.46□□□□□ -1.54
P20040 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
P20040 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
P20040 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.46□□□□□ -1.54
P20040 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.45□□□□□ -1.54
P20040 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
P20040 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.45□□□□□ -1.54
P20040 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
P20040 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.45□□□□□ -1.54
P20040 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms