Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.2□□□□□ -1.42
Lire1P11260 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Lire1P11260 Gm12573-201ENSMUST00000118158 286 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Gm15801-201ENSMUST00000120920 522 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Gm15596-201ENSMUST00000121139 784 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Gm5166-201ENSMUST00000121332 573 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Gm13669-201ENSMUST00000122366 457 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Gm6081-201ENSMUST00000134472 489 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Gm24186-201ENSMUST00000157983 127 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Gm8783-201ENSMUST00000159764 522 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Gm27266-201ENSMUST00000184521 123 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Gm29509-201ENSMUST00000185716 321 ntBASIC6.2□□□□□ -1.42
Lire1P11260 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.2□□□□□ -1.42
Lire1P11260 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.2□□□□□ -1.42
Lire1P11260 Gm37669-201ENSMUST00000192184 820 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC6.2□□□□□ -1.42
Lire1P11260 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC6.2□□□□□ -1.42
Lire1P11260 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 CT030030.1-201ENSMUST00000218809 152 ntBASIC6.2□□□□□ -1.42
Lire1P11260 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.2□□□□□ -1.42
Lire1P11260 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.2□□□□□ -1.42
Lire1P11260 AV026068-224ENSMUST00000224827 928 ntBASIC6.2□□□□□ -1.42
Lire1P11260 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.2□□□□□ -1.42
Lire1P11260 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Lire1P11260 Gm5582-201ENSMUST00000075251 522 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Snora21-201ENSMUST00000082967 137 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Gm24451-201ENSMUST00000083353 133 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Mir296-201ENSMUST00000083587 79 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Lire1P11260 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Lire1P11260 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.2□□□□□ -1.42
Lire1P11260 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Lire1P11260 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Gm35629-201ENSMUST00000209684 2241 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Lire1P11260 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Lire1P11260 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 AC139754.3-201ENSMUST00000220444 1627 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm22781-201ENSMUST00000104083 137 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm25724-201ENSMUST00000104531 117 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm13141-201ENSMUST00000117417 456 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm12451-201ENSMUST00000121636 633 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm12778-201ENSMUST00000122341 333 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.19□□□□□ -1.42
Lire1P11260 Gm23756-201ENSMUST00000157582 114 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Lire1P11260 Gm10410-201ENSMUST00000180138 384 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm26898-201ENSMUST00000181678 384 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm10136-201ENSMUST00000183196 435 ntBASIC6.19□□□□□ -1.42
Lire1P11260 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.19□□□□□ -1.42
Lire1P11260 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm18843-201ENSMUST00000194982 719 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.19□□□□□ -1.42
Lire1P11260 Gm5711-201ENSMUST00000197896 421 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm4410-201ENSMUST00000199349 686 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm43377-201ENSMUST00000201640 455 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm5027-201ENSMUST00000206700 375 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.19□□□□□ -1.42
Lire1P11260 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.19□□□□□ -1.42
Lire1P11260 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.19□□□□□ -1.42
Lire1P11260 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.19□□□□□ -1.42
Lire1P11260 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.19□□□□□ -1.42
Lire1P11260 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.19□□□□□ -1.42
Lire1P11260 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.19□□□□□ -1.42
Lire1P11260 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Lire1P11260 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Gm22684-201ENSMUST00000082849 132 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Lire1P11260 Naip3-201ENSMUST00000118082 4208 ntBASIC6.19□□□□□ -1.42
Lire1P11260 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Gm43085-201ENSMUST00000202859 3132 ntBASIC6.19□□□□□ -1.42
Lire1P11260 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Lire1P11260 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms