Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm12442-201ENSMUST00000118372 338 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm13818-201ENSMUST00000119441 511 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm11341-201ENSMUST00000122316 447 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm12152-201ENSMUST00000122465 684 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm8183-201ENSMUST00000183134 980 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm29464-201ENSMUST00000187692 513 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Chmp6P0C0A3 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Gm22714-201ENSMUST00000116894 78 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Gm8692-201ENSMUST00000118102 438 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Gm12307-201ENSMUST00000120581 590 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Gm17824-201ENSMUST00000197690 805 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 AC160114.2-201ENSMUST00000223021 300 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Gm9293-201ENSMUST00000223096 306 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Chmp6P0C0A3 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.65□□□□□ -1.34
Chmp6P0C0A3 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Gm23311-201ENSMUST00000104152 134 ntBASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Gm13740-201ENSMUST00000120590 310 ntBASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.65□□□□□ -1.34
Chmp6P0C0A3 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms