Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm12258-201ENSMUST00000093768 2524 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC6.19□□□□□ -1.42
Hoxd3P09027 AC162467.2-201ENSMUST00000219397 2571 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm37151-201ENSMUST00000194631 5007 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm24472-201ENSMUST00000104484 132 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm24275-201ENSMUST00000116780 146 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm12713-201ENSMUST00000118404 764 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm11625-201ENSMUST00000119535 296 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm14269-201ENSMUST00000120455 306 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm11259-201ENSMUST00000120554 715 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm14925-201ENSMUST00000120611 438 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Defa-ps10-201ENSMUST00000121649 171 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm25781-201ENSMUST00000122527 84 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC6.19□□□□□ -1.42
Hoxd3P09027 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC6.19□□□□□ -1.42
Hoxd3P09027 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm26408-201ENSMUST00000157672 127 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm17223-201ENSMUST00000171413 481 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Mir3072-201ENSMUST00000175610 83 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Mir1231-201ENSMUST00000175639 81 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hoxd3P09027 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm5327-201ENSMUST00000182864 1009 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm29126-201ENSMUST00000188686 151 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm5575-201ENSMUST00000190879 398 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm29551-201ENSMUST00000190913 698 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm37616-201ENSMUST00000193974 322 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm26413-202ENSMUST00000198972 127 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm5586-201ENSMUST00000206264 795 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 AC154307.1-201ENSMUST00000214799 90 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.19□□□□□ -1.42
Hoxd3P09027 AC122905.2-201ENSMUST00000220325 269 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 AC138667.2-201ENSMUST00000224880 598 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hoxd3P09027 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm26003-201ENSMUST00000083061 113 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Mir146b-201ENSMUST00000093619 109 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm37647-201ENSMUST00000194556 3143 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm44288-201ENSMUST00000205061 2795 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Synpo2-201ENSMUST00000051443 3719 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Hoxd3P09027 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.19□□□□□ -1.42
Hoxd3P09027 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hoxd3P09027 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Hoxd3P09027 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms