Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
H2afb2S4R1M3 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
H2afb2S4R1M3 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
H2afb2S4R1M3 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
H2afb2S4R1M3 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
H2afb2S4R1M3 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
H2afb2S4R1M3 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.09□□□□□ -1.43
H2afb2S4R1M3 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.09□□□□□ -1.43
H2afb2S4R1M3 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
H2afb2S4R1M3 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm9506-201ENSMUST00000118516 320 ntBASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm8550-201ENSMUST00000161621 653 ntBASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm21877-201ENSMUST00000185640 694 ntBASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm36378-201ENSMUST00000201709 388 ntBASIC6.08□□□□□ -1.44
H2afb2S4R1M3 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
H2afb2S4R1M3 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm12653-201ENSMUST00000117778 561 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm13702-201ENSMUST00000118542 825 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm12308-201ENSMUST00000120440 389 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm26353-201ENSMUST00000158224 255 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm22569-201ENSMUST00000175545 124 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm5886-202ENSMUST00000203957 522 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm5229-201ENSMUST00000039375 354 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.07□□□□□ -1.44
H2afb2S4R1M3 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.07□□□□□ -1.44
H2afb2S4R1M3 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms