Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm22604-201ENSMUST00000157604 311 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm4202-201ENSMUST00000169025 733 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm26607-201ENSMUST00000180661 867 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm37838-201ENSMUST00000194464 312 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm37871-201ENSMUST00000194973 688 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm4870-201ENSMUST00000198525 1251 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm43561-201ENSMUST00000199866 448 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm44279-201ENSMUST00000205154 472 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm9535-201ENSMUST00000218499 768 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 AC101205.1-201ENSMUST00000227916 907 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.99□□□□□ -1.45
Lima1Q9ERG0 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm26340-201ENSMUST00000102365 99 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm14116-201ENSMUST00000117733 805 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm8312-201ENSMUST00000119380 618 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm22214-201ENSMUST00000157563 172 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm25487-201ENSMUST00000158725 125 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Mir7058-201ENSMUST00000184637 75 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm5334-201ENSMUST00000187472 720 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm7804-202ENSMUST00000194187 854 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm45008-201ENSMUST00000206420 493 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm44837-201ENSMUST00000206863 717 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm18600-201ENSMUST00000207205 505 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 AC069561.1-201ENSMUST00000213750 424 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lima1Q9ERG0 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lima1Q9ERG0 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms