Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm9027-201ENSMUST00000165914 661 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm22548-201ENSMUST00000174899 78 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm23550-201ENSMUST00000179003 121 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm25123-201ENSMUST00000179154 121 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm25353-201ENSMUST00000179366 121 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm22992-201ENSMUST00000179496 121 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm25892-201ENSMUST00000179867 121 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm24092-201ENSMUST00000180257 121 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm27653-201ENSMUST00000185037 136 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm7266-201ENSMUST00000187999 405 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm37135-201ENSMUST00000192652 534 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm18952-201ENSMUST00000194471 846 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm15732-201ENSMUST00000079794 480 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm26289-201ENSMUST00000104169 131 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm13469-201ENSMUST00000118231 350 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm23450-201ENSMUST00000178285 91 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm17048-201ENSMUST00000179266 847 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm28885-201ENSMUST00000185615 563 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm37770-201ENSMUST00000192855 772 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm7499-201ENSMUST00000210423 813 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm19212-201ENSMUST00000216642 862 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm9535-201ENSMUST00000218499 768 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdc40Q9DC48 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdc40Q9DC48 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms