Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm27210-201ENSMUST00000184263 402 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm8241-201ENSMUST00000189286 816 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm37135-201ENSMUST00000192652 534 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm37966-201ENSMUST00000193122 326 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Igkv12-67-201ENSMUST00000197806 354 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm44075-201ENSMUST00000204208 216 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm45448-201ENSMUST00000211739 209 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm8290-201ENSMUST00000218202 477 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm4803-201ENSMUST00000218729 1279 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC7□□□□□ -1.29
Smc1aQ9CU62 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 AC154861.1-201ENSMUST00000223767 800 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Olfr519-201ENSMUST00000084752 960 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm42503-201ENSMUST00000199080 3706 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm37186-201ENSMUST00000195629 2861 ntBASIC7□□□□□ -1.29
Smc1aQ9CU62 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Smc1aQ9CU62 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Smc1aQ9CU62 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Mir290a-201ENSMUST00000104627 83 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm12985-201ENSMUST00000118376 183 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm7058-201ENSMUST00000119209 902 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm26346-201ENSMUST00000157525 329 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm24687-201ENSMUST00000157758 241 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm28527-201ENSMUST00000185210 297 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm37493-201ENSMUST00000193167 433 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm43084-201ENSMUST00000200696 947 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm44809-201ENSMUST00000208305 993 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm24695-201ENSMUST00000083877 83 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Smc1aQ9CU62 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm22370-201ENSMUST00000102422 83 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm25346-201ENSMUST00000104509 128 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm4997-201ENSMUST00000154056 360 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Mir5110-201ENSMUST00000175537 87 ntBASIC6.98□□□□□ -1.29
Smc1aQ9CU62 Gm24465-201ENSMUST00000178398 107 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms