Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 CU024892.1-201ENSMUST00000224869 515 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 AC106830.1-201ENSMUST00000228032 1003 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Snord65-201ENSMUST00000104269 72 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm13604-201ENSMUST00000119332 482 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm26486-201ENSMUST00000158021 110 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm26353-201ENSMUST00000158224 255 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Mir6367-201ENSMUST00000183385 102 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm37380-201ENSMUST00000193752 397 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm17937-201ENSMUST00000197908 742 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm18618-201ENSMUST00000222211 473 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm21731-201ENSMUST00000079524 489 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.17□□□□□ -1.42
Msh4Q99MT2 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Msh4Q99MT2 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Msh4Q99MT2 Gm5754-201ENSMUST00000118774 892 ntBASIC6.16□□□□□ -1.42
Msh4Q99MT2 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms