Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm18342-201ENSMUST00000186987 694 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm2427-201ENSMUST00000189121 881 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm29605-201ENSMUST00000190800 292 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm37439-201ENSMUST00000193150 856 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm36932-201ENSMUST00000195226 929 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm44227-201ENSMUST00000203576 241 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm31711-201ENSMUST00000220687 196 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm9237-201ENSMUST00000221499 548 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm10205-201ENSMUST00000087431 234 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdk5rap3Q99LM2 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm6884-201ENSMUST00000119318 615 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm7212-201ENSMUST00000120817 348 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm12399-201ENSMUST00000121475 446 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm12175-201ENSMUST00000122081 345 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm23894-201ENSMUST00000158107 313 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm17121-201ENSMUST00000170414 847 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm20454-201ENSMUST00000172713 221 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm17222-201ENSMUST00000180135 847 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm26595-201ENSMUST00000181585 484 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm6009-201ENSMUST00000210848 280 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 AV026068-220ENSMUST00000224153 1147 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Gm24036-201ENSMUST00000082868 156 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.4□□□□□ -1.38
Cdk5rap3Q99LM2 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 BC055308-201ENSMUST00000193380 2538 ntBASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Cdk5rap3Q99LM2 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdk5rap3Q99LM2 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdk5rap3Q99LM2 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Cdk5rap3Q99LM2 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cdk5rap3Q99LM2 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdk5rap3Q99LM2 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdk5rap3Q99LM2 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdk5rap3Q99LM2 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdk5rap3Q99LM2 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms