Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm23050-201ENSMUST00000158775 165 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm8783-201ENSMUST00000159764 522 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm22932-201ENSMUST00000175510 72 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm26057-201ENSMUST00000178099 165 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm24957-201ENSMUST00000179604 132 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm8860-201ENSMUST00000193160 445 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm29745-201ENSMUST00000198005 687 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm31166-201ENSMUST00000209326 288 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm45739-201ENSMUST00000213094 388 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm9088-201ENSMUST00000220237 508 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 AC125117.2-201ENSMUST00000228344 1140 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm5582-201ENSMUST00000075251 522 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm26130-201ENSMUST00000083171 138 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cstf1Q99LC2 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm22103-201ENSMUST00000116733 121 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm26475-201ENSMUST00000116769 121 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm23620-201ENSMUST00000116812 121 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm25042-201ENSMUST00000116856 121 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm25540-201ENSMUST00000116880 121 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm4911-201ENSMUST00000119388 945 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm18833-201ENSMUST00000173218 862 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm23550-201ENSMUST00000179003 121 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm25123-201ENSMUST00000179154 121 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm25353-201ENSMUST00000179366 121 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm22992-201ENSMUST00000179496 121 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm25892-201ENSMUST00000179867 121 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm24092-201ENSMUST00000180257 121 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Mir7006-201ENSMUST00000183624 69 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm27355-201ENSMUST00000185045 128 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm3605-201ENSMUST00000185858 440 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm37070-201ENSMUST00000193272 460 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm8869-201ENSMUST00000195222 947 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm45473-201ENSMUST00000211452 616 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.29□□□□□ -1.4
Cstf1Q99LC2 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cstf1Q99LC2 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cstf1Q99LC2 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cstf1Q99LC2 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.28□□□□□ -1.4
Cstf1Q99LC2 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cstf1Q99LC2 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.28□□□□□ -1.4
Cstf1Q99LC2 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.28□□□□□ -1.4
Cstf1Q99LC2 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 245.7 ms