Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm15125-201ENSMUST00000116185 800 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm15159-201ENSMUST00000117062 764 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm12392-201ENSMUST00000118014 938 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm12090-201ENSMUST00000118692 758 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm12135-201ENSMUST00000119170 466 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm14906-201ENSMUST00000119265 390 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm11991-201ENSMUST00000119652 1074 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm15311-201ENSMUST00000119682 282 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm15305-201ENSMUST00000120354 288 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm26321-201ENSMUST00000157740 242 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm24241-201ENSMUST00000157787 145 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm24236-201ENSMUST00000157794 134 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm22990-201ENSMUST00000175427 89 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm24925-201ENSMUST00000178157 107 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm29197-201ENSMUST00000185922 702 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm28117-201ENSMUST00000188472 371 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm18849-201ENSMUST00000189861 560 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 AC154296.3-201ENSMUST00000214427 712 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm18040-201ENSMUST00000217922 827 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm8607-201ENSMUST00000221864 431 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 AC167192.1-201ENSMUST00000225908 139 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 CT030254.3-201ENSMUST00000225959 1231 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm24621-201ENSMUST00000082679 140 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm23054-201ENSMUST00000082804 162 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.28□□□□□ -1.4
Clrn1Q8K445 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clrn1Q8K445 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Clrn1Q8K445 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Clrn1Q8K445 Mir669l-201ENSMUST00000103771 98 ntBASIC6.27□□□□□ -1.41
Clrn1Q8K445 Gm14158-201ENSMUST00000118409 308 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms