Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Brf1Q8CFK2 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Brf1Q8CFK2 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Brf1Q8CFK2 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
Brf1Q8CFK2 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Brf1Q8CFK2 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Brf1Q8CFK2 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Brf1Q8CFK2 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Brf1Q8CFK2 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC7.51□□□□□ -1.21
Brf1Q8CFK2 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC7.51□□□□□ -1.21
Brf1Q8CFK2 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC7.51□□□□□ -1.21
Brf1Q8CFK2 Gm37060-201ENSMUST00000194997 2397 ntBASIC7.51□□□□□ -1.21
Brf1Q8CFK2 AC192333.5-201ENSMUST00000224620 2350 ntBASIC7.51□□□□□ -1.21
Brf1Q8CFK2 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm19093-201ENSMUST00000210671 1454 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm37943-201ENSMUST00000194053 3944 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm44215-201ENSMUST00000204910 2711 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm24272-201ENSMUST00000102329 98 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm13870-201ENSMUST00000117214 1023 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm12262-201ENSMUST00000119915 305 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm11925-201ENSMUST00000121375 535 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm12438-201ENSMUST00000122034 336 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm16269-201ENSMUST00000160532 409 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm6590-201ENSMUST00000203343 687 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm44837-201ENSMUST00000206863 717 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 AC156025.2-201ENSMUST00000225907 1533 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm42607-201ENSMUST00000200221 3393 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Gm43341-201ENSMUST00000200104 1308 ntBASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Brf1Q8CFK2 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm45250-201ENSMUST00000209414 3592 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm37278-201ENSMUST00000191619 2872 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm44229-201ENSMUST00000203211 2487 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm13469-201ENSMUST00000118231 350 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm3931-201ENSMUST00000119038 455 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm11609-201ENSMUST00000121926 793 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm5125-201ENSMUST00000148614 624 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm16571-201ENSMUST00000159112 291 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm6541-201ENSMUST00000165542 561 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm37758-201ENSMUST00000194275 629 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm3544-201ENSMUST00000196129 305 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm17937-201ENSMUST00000197908 742 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm43157-201ENSMUST00000198223 412 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm43946-201ENSMUST00000204058 886 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm44243-201ENSMUST00000204323 692 ntBASIC7.49□□□□□ -1.21
Brf1Q8CFK2 Gm44232-201ENSMUST00000204537 225 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms