Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Gm6489-201ENSMUST00000178167 696 ntBASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Gm29156-201ENSMUST00000187764 499 ntBASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Gm29489-201ENSMUST00000188934 324 ntBASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc28aQ8CEI3 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Gm14331-201ENSMUST00000120396 409 ntBASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Snora47-201ENSMUST00000157483 138 ntBASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Gm27804-201ENSMUST00000185135 119 ntBASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Gm36932-201ENSMUST00000195226 929 ntBASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Gm24036-201ENSMUST00000082868 156 ntBASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc28aQ8CEI3 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm23527-201ENSMUST00000104570 130 ntBASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm24103-201ENSMUST00000174930 77 ntBASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm24081-201ENSMUST00000175177 125 ntBASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm23631-201ENSMUST00000175291 123 ntBASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm5871-201ENSMUST00000176461 718 ntBASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm28941-201ENSMUST00000185536 1017 ntBASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm37774-201ENSMUST00000194401 245 ntBASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Gm18103-201ENSMUST00000216621 779 ntBASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc28aQ8CEI3 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms