Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Gm8872-201ENSMUST00000197475 1341 ntBASIC8.6□□□□□ -1.03
Usp47Q8BY87 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Gm25564-201ENSMUST00000104604 132 ntBASIC8.6□□□□□ -1.03
Usp47Q8BY87 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Usp47Q8BY87 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Gm18407-201ENSMUST00000192126 790 ntBASIC8.6□□□□□ -1.03
Usp47Q8BY87 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 AC133650.1-201ENSMUST00000217243 578 ntBASIC8.6□□□□□ -1.03
Usp47Q8BY87 Gm18413-201ENSMUST00000221573 655 ntBASIC8.6□□□□□ -1.03
Usp47Q8BY87 AC124709.3-201ENSMUST00000227294 171 ntBASIC8.6□□□□□ -1.03
Usp47Q8BY87 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Usp47Q8BY87 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Usp47Q8BY87 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp47Q8BY87 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp47Q8BY87 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC8.59□□□□□ -1.03
Usp47Q8BY87 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.59□□□□□ -1.03
Usp47Q8BY87 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp47Q8BY87 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Gm14970-201ENSMUST00000122289 355 ntBASIC8.59□□□□□ -1.03
Usp47Q8BY87 Gm26167-201ENSMUST00000158423 253 ntBASIC8.59□□□□□ -1.03
Usp47Q8BY87 Gm43946-201ENSMUST00000204058 886 ntBASIC8.59□□□□□ -1.03
Usp47Q8BY87 Gm45185-201ENSMUST00000207556 404 ntBASIC8.59□□□□□ -1.03
Usp47Q8BY87 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Gm6009-201ENSMUST00000210848 280 ntBASIC8.59□□□□□ -1.03
Usp47Q8BY87 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp47Q8BY87 AC124826.1-201ENSMUST00000221651 325 ntBASIC8.59□□□□□ -1.03
Usp47Q8BY87 AC154616.2-201ENSMUST00000227978 398 ntBASIC8.59□□□□□ -1.03
Usp47Q8BY87 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp47Q8BY87 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC8.59□□□□□ -1.04
Usp47Q8BY87 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Usp47Q8BY87 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.04
Usp47Q8BY87 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
Usp47Q8BY87 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
Usp47Q8BY87 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp47Q8BY87 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm37278-201ENSMUST00000191619 2872 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm44440-201ENSMUST00000203139 2373 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm43258-201ENSMUST00000200312 1950 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm12077-201ENSMUST00000117049 364 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm14938-201ENSMUST00000119482 943 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm24303-201ENSMUST00000178237 126 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm7713-201ENSMUST00000181201 1007 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm27960-201ENSMUST00000183445 184 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm5554-201ENSMUST00000199726 1206 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 n-TStga1-201ENSMUST00000199903 109 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 Api5-ps-201ENSMUST00000206607 577 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm46223-201ENSMUST00000215196 675 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 AC154595.2-201ENSMUST00000225067 310 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm36947-201ENSMUST00000194709 2249 ntBASIC8.58□□□□□ -1.04
Usp47Q8BY87 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Usp47Q8BY87 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms