Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx55Q6ZPL9 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 AC166358.5-201ENSMUST00000220706 1302 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 AC153959.1-201ENSMUST00000213617 1694 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm13451-201ENSMUST00000117649 592 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm13013-201ENSMUST00000119087 523 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm14294-201ENSMUST00000119749 751 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm15279-201ENSMUST00000155593 288 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm8506-201ENSMUST00000186661 829 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm19002-201ENSMUST00000192649 1012 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm35013-201ENSMUST00000197218 832 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm5990-201ENSMUST00000203126 746 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm34149-201ENSMUST00000203547 304 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm43946-201ENSMUST00000204058 886 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm45071-201ENSMUST00000205353 571 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm44837-201ENSMUST00000206863 717 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm2531-201ENSMUST00000075609 512 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm23058-201ENSMUST00000093703 107 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm5512-201ENSMUST00000218013 1353 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx55Q6ZPL9 Gm43341-201ENSMUST00000200104 1308 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm37864-201ENSMUST00000195308 3075 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm23910-201ENSMUST00000104597 132 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm12901-201ENSMUST00000118690 532 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm2959-201ENSMUST00000169844 621 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm22932-201ENSMUST00000175510 72 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm24957-201ENSMUST00000179604 132 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm37265-201ENSMUST00000191698 885 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm5886-202ENSMUST00000203957 522 ntBASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC7.28□□□□□ -1.24
Ddx55Q6ZPL9 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms