Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm24709-201ENSMUST00000104123 132 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm22953-201ENSMUST00000116724 101 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm7212-201ENSMUST00000120817 348 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm2986-201ENSMUST00000121603 382 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm15618-201ENSMUST00000121610 452 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm23894-201ENSMUST00000158107 313 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm10410-201ENSMUST00000180138 384 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm26898-201ENSMUST00000181678 384 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm18799-201ENSMUST00000189104 913 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm28586-201ENSMUST00000189857 456 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm24695-201ENSMUST00000083877 83 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm22351-201ENSMUST00000083925 107 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trafd1Q3UDK1 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm14098-201ENSMUST00000119295 623 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm23386-201ENSMUST00000158585 144 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm10177-201ENSMUST00000160052 444 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm4152-201ENSMUST00000172675 259 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm27193-201ENSMUST00000184217 586 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm27998-201ENSMUST00000184902 361 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm8367-201ENSMUST00000186145 887 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm29385-201ENSMUST00000186831 363 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm28996-201ENSMUST00000190316 721 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm29551-201ENSMUST00000190913 698 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm18940-201ENSMUST00000222518 871 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.11□□□□□ -1.43
Trafd1Q3UDK1 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 175.6 ms