Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CiitaP79621 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.78□□□□□ -1.32
CiitaP79621 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.78□□□□□ -1.32
CiitaP79621 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.78□□□□□ -1.32
CiitaP79621 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CiitaP79621 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.78□□□□□ -1.32
CiitaP79621 Gm12618-201ENSMUST00000121754 483 ntBASIC6.78□□□□□ -1.32
CiitaP79621 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.78□□□□□ -1.32
CiitaP79621 Gm22655-201ENSMUST00000174949 96 ntBASIC6.78□□□□□ -1.32
CiitaP79621 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.78□□□□□ -1.32
CiitaP79621 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 Gm29650-201ENSMUST00000188485 742 ntBASIC6.78□□□□□ -1.32
CiitaP79621 Gm17934-201ENSMUST00000192818 422 ntBASIC6.78□□□□□ -1.32
CiitaP79621 Gm37973-201ENSMUST00000195767 1289 ntBASIC6.78□□□□□ -1.32
CiitaP79621 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.78□□□□□ -1.32
CiitaP79621 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.78□□□□□ -1.32
CiitaP79621 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.78□□□□□ -1.32
CiitaP79621 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC6.78□□□□□ -1.32
CiitaP79621 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.78□□□□□ -1.32
CiitaP79621 AC137871.3-201ENSMUST00000226628 225 ntBASIC6.78□□□□□ -1.32
CiitaP79621 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.78□□□□□ -1.32
CiitaP79621 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
CiitaP79621 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.78□□□□□ -1.32
CiitaP79621 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CiitaP79621 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CiitaP79621 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CiitaP79621 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
CiitaP79621 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.78□□□□□ -1.32
CiitaP79621 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
CiitaP79621 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.78□□□□□ -1.32
CiitaP79621 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
CiitaP79621 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.32
CiitaP79621 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.77□□□□□ -1.33
CiitaP79621 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CiitaP79621 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 Gm23739-201ENSMUST00000102295 108 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm22952-201ENSMUST00000116720 120 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm14331-201ENSMUST00000120396 409 ntBASIC6.77□□□□□ -1.33
CiitaP79621 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.77□□□□□ -1.33
CiitaP79621 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm25065-201ENSMUST00000177914 132 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm24465-201ENSMUST00000178398 107 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm25891-201ENSMUST00000180050 132 ntBASIC6.77□□□□□ -1.33
CiitaP79621 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.77□□□□□ -1.33
CiitaP79621 Gm28149-201ENSMUST00000187102 378 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.77□□□□□ -1.33
CiitaP79621 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC6.77□□□□□ -1.33
CiitaP79621 Gm28768-201ENSMUST00000189034 378 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm37430-201ENSMUST00000193039 196 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC6.77□□□□□ -1.33
CiitaP79621 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC6.77□□□□□ -1.33
CiitaP79621 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 Gm43033-201ENSMUST00000199682 425 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.77□□□□□ -1.33
CiitaP79621 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.77□□□□□ -1.33
CiitaP79621 Gm9293-201ENSMUST00000223096 306 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.77□□□□□ -1.33
CiitaP79621 Gm2614-201ENSMUST00000223227 403 ntBASIC6.77□□□□□ -1.33
CiitaP79621 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.77□□□□□ -1.33
CiitaP79621 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CiitaP79621 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CiitaP79621 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
CiitaP79621 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.77□□□□□ -1.33
CiitaP79621 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
CiitaP79621 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CiitaP79621 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.76□□□□□ -1.33
CiitaP79621 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms