Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm23748-201ENSMUST00000104227 131 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm24284-201ENSMUST00000104240 142 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm15149-201ENSMUST00000119370 360 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm11483-201ENSMUST00000119839 247 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Mir7115-201ENSMUST00000184275 64 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Mir7029-201ENSMUST00000184777 61 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm4525-201ENSMUST00000198831 254 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm44817-201ENSMUST00000205416 453 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm44972-201ENSMUST00000206419 406 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm9357-201ENSMUST00000207138 805 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm17997-201ENSMUST00000211801 840 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm17849-201ENSMUST00000219788 853 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 AC159263.3-201ENSMUST00000223434 460 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm5341-201ENSMUST00000058881 489 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 n-R5s169-201ENSMUST00000083110 120 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm43771-201ENSMUST00000202931 1578 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Hmgb1P63158 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Hmgb1P63158 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Hmgb1P63158 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Hmgb1P63158 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Hmgb1P63158 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Thap6-201ENSMUST00000191860 3151 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm12072-201ENSMUST00000118293 715 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm11433-201ENSMUST00000118318 228 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm12849-201ENSMUST00000120013 739 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm14070-201ENSMUST00000120773 428 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Atp2b4-208ENSMUST00000167348 243 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm29048-201ENSMUST00000185342 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm29403-201ENSMUST00000185491 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm28234-201ENSMUST00000185657 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm28248-201ENSMUST00000186093 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm29633-202ENSMUST00000186217 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm28829-201ENSMUST00000186231 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm19206-201ENSMUST00000186401 827 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm28261-201ENSMUST00000186417 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm28815-201ENSMUST00000186751 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm28608-201ENSMUST00000186860 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm28420-201ENSMUST00000187340 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm28106-201ENSMUST00000187640 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm28698-201ENSMUST00000187734 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm29224-201ENSMUST00000187965 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm29189-201ENSMUST00000188018 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm29476-201ENSMUST00000188397 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm29505-201ENSMUST00000188424 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm28125-201ENSMUST00000188470 615 ntBASIC7.32□□□□□ -1.24
Hmgb1P63158 Gm29391-201ENSMUST00000188545 615 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms