Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 Gm12101-201ENSMUST00000121590 390 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 Gm2986-201ENSMUST00000121603 382 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cdh11P55288 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh11P55288 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdh11P55288 Gm23968-201ENSMUST00000175047 125 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 Gm9529-201ENSMUST00000177598 579 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 Mir7082-201ENSMUST00000183526 92 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh11P55288 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 Gm35619-201ENSMUST00000222548 600 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh11P55288 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh11P55288 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cdh11P55288 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh11P55288 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
Cdh11P55288 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Cdh11P55288 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Cdh11P55288 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh11P55288 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdh11P55288 BC055308-201ENSMUST00000193380 2538 ntBASIC5.69□□□□□ -1.5
Cdh11P55288 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdh11P55288 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 Naip3-201ENSMUST00000118082 4208 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdh11P55288 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Gm24173-201ENSMUST00000104130 128 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Gm10936-201ENSMUST00000105264 252 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm12106-201ENSMUST00000116006 1200 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Gm12040-201ENSMUST00000118357 537 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm24382-201ENSMUST00000122698 107 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm24359-201ENSMUST00000158418 221 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Gm9064-201ENSMUST00000163579 566 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.68□□□□□ -1.5
Cdh11P55288 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm38217-201ENSMUST00000194358 910 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Gm19080-201ENSMUST00000196082 550 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Gm43037-201ENSMUST00000196808 250 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Gm43576-201ENSMUST00000197937 871 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm18838-201ENSMUST00000204855 886 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm22351-201ENSMUST00000083925 107 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Gm10205-201ENSMUST00000087431 234 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdh11P55288 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.68□□□□□ -1.5
Cdh11P55288 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Cdh11P55288 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.68□□□□□ -1.5
Cdh11P55288 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Cdh11P55288 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh11P55288 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh11P55288 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh11P55288 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdh11P55288 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.67□□□□□ -1.5
Cdh11P55288 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh11P55288 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh11P55288 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdh11P55288 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.67□□□□□ -1.5
Cdh11P55288 Gm26144-201ENSMUST00000104475 132 ntBASIC5.67□□□□□ -1.5
Cdh11P55288 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms