Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm38279-201ENSMUST00000194067 1131 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm8924-201ENSMUST00000197405 1132 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm43926-201ENSMUST00000203978 430 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm17984-201ENSMUST00000205286 859 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.12□□□□□ -1.11
Rfx1P48377 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm18940-201ENSMUST00000222518 871 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 AC153152.2-201ENSMUST00000223165 959 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Zfp874a-208ENSMUST00000225479 1092 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rfx1P48377 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rfx1P48377 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rfx1P48377 n-R5s156-201ENSMUST00000083377 105 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm23104-201ENSMUST00000083722 104 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rfx1P48377 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm44750-201ENSMUST00000206185 2223 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
Rfx1P48377 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Rfx1P48377 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 AC124183.1-201ENSMUST00000222367 2135 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Gm37951-201ENSMUST00000192963 3032 ntBASIC8.12□□□□□ -1.11
Rfx1P48377 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC8.12□□□□□ -1.11
Rfx1P48377 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC8.12□□□□□ -1.11
Rfx1P48377 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Rfx1P48377 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC8.11□□□□□ -1.11
Rfx1P48377 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Rfx1P48377 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Rfx1P48377 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 AC153143.2-201ENSMUST00000220999 1804 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 Mir678-201ENSMUST00000102114 84 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 Gm11393-201ENSMUST00000118019 288 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC8.11□□□□□ -1.11
Rfx1P48377 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 Gm3091-201ENSMUST00000163408 484 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Gm18191-201ENSMUST00000174624 824 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Gm23139-201ENSMUST00000179454 132 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Mir378d-201ENSMUST00000184232 110 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Gm18501-201ENSMUST00000185363 664 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Rfx1P48377 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.11□□□□□ -1.11
Rfx1P48377 Gm42720-201ENSMUST00000196813 300 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Amd-ps5-201ENSMUST00000198406 989 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Gm36448-201ENSMUST00000199916 438 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC8.11□□□□□ -1.11
Rfx1P48377 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC8.11□□□□□ -1.11
Rfx1P48377 Gm18860-201ENSMUST00000212029 764 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC8.11□□□□□ -1.11
Rfx1P48377 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.11□□□□□ -1.11
Rfx1P48377 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC8.11□□□□□ -1.11
Rfx1P48377 AC155305.1-201ENSMUST00000222207 319 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC8.11□□□□□ -1.11
Rfx1P48377 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 AC118006.3-201ENSMUST00000223948 1176 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Rfx1P48377 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Rfx1P48377 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Rfx1P48377 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Rfx1P48377 Gm7731-201ENSMUST00000091759 470 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC8.11□□□□□ -1.11
Rfx1P48377 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Rfx1P48377 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Rfx1P48377 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 AC164567.3-201ENSMUST00000217743 2869 ntBASIC8.11□□□□□ -1.11
Rfx1P48377 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rfx1P48377 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Rfx1P48377 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Rfx1P48377 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Rfx1P48377 AC124426.1-203ENSMUST00000221814 1362 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 AC153971.1-201ENSMUST00000215097 3811 ntBASIC8.1□□□□□ -1.11
Rfx1P48377 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Rfx1P48377 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Rfx1P48377 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rfx1P48377 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms