Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm27185-201ENSMUST00000184296 247 ntBASIC5.82□□□□□ -1.48
Tnfsf4P43488 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.82□□□□□ -1.48
Tnfsf4P43488 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Tnfsf4P43488 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Tnfsf4P43488 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.82□□□□□ -1.48
Tnfsf4P43488 CT030238.4-202ENSMUST00000226143 745 ntBASIC5.82□□□□□ -1.48
Tnfsf4P43488 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Tnfsf4P43488 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.82□□□□□ -1.48
Tnfsf4P43488 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.82□□□□□ -1.48
Tnfsf4P43488 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.82□□□□□ -1.48
Tnfsf4P43488 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 AC132465.1-201ENSMUST00000219938 1307 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm26340-201ENSMUST00000102365 99 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm22714-201ENSMUST00000116894 78 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm13493-201ENSMUST00000120318 493 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm22701-201ENSMUST00000175371 291 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm5947-201ENSMUST00000179156 714 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm5645-201ENSMUST00000179597 714 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm37774-201ENSMUST00000194401 245 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm37358-201ENSMUST00000195492 479 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm4332-201ENSMUST00000196114 346 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm43850-201ENSMUST00000202021 578 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm18290-201ENSMUST00000202900 844 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 AC124489.3-201ENSMUST00000224037 278 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm5229-201ENSMUST00000039375 354 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.81□□□□□ -1.48
Tnfsf4P43488 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Tnfsf4P43488 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm42837-201ENSMUST00000197071 2829 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm11990-201ENSMUST00000121505 897 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.8□□□□□ -1.48
Tnfsf4P43488 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.8□□□□□ -1.48
Tnfsf4P43488 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms