Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cxcl12P40224 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC6.42□□□□□ -1.38
Cxcl12P40224 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.42□□□□□ -1.38
Cxcl12P40224 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.42□□□□□ -1.38
Cxcl12P40224 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cxcl12P40224 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cxcl12P40224 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Cxcl12P40224 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.42□□□□□ -1.38
Cxcl12P40224 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cxcl12P40224 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cxcl12P40224 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cxcl12P40224 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cxcl12P40224 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cxcl12P40224 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.42□□□□□ -1.38
Cxcl12P40224 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Cxcl12P40224 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cxcl12P40224 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.42□□□□□ -1.38
Cxcl12P40224 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cxcl12P40224 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cxcl12P40224 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Cxcl12P40224 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm42837-201ENSMUST00000197071 2829 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.41□□□□□ -1.38
Cxcl12P40224 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Cxcl12P40224 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cxcl12P40224 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm13811-201ENSMUST00000117800 256 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm14900-201ENSMUST00000120304 733 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.41□□□□□ -1.38
Cxcl12P40224 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm18117-201ENSMUST00000187720 742 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm2011-203ENSMUST00000203750 435 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm18007-201ENSMUST00000205019 844 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm18413-201ENSMUST00000221573 655 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm24041-201ENSMUST00000083115 156 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm22053-201ENSMUST00000083394 200 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cxcl12P40224 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cxcl12P40224 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
Cxcl12P40224 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.41□□□□□ -1.38
Cxcl12P40224 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.41□□□□□ -1.38
Cxcl12P40224 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cxcl12P40224 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cxcl12P40224 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
Cxcl12P40224 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cxcl12P40224 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cxcl12P40224 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm42490-201ENSMUST00000198595 2064 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Cxcl12P40224 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cxcl12P40224 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cxcl12P40224 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.4□□□□□ -1.38
Cxcl12P40224 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm12077-201ENSMUST00000117049 364 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm16200-201ENSMUST00000120385 331 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm12685-201ENSMUST00000121702 214 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm12317-201ENSMUST00000122307 319 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm22106-201ENSMUST00000122544 127 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.4□□□□□ -1.38
Cxcl12P40224 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cxcl12P40224 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm15838-201ENSMUST00000161575 180 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm5139-201ENSMUST00000175943 249 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm25019-201ENSMUST00000179732 110 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm5306-201ENSMUST00000203325 757 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm19900-201ENSMUST00000207285 576 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm44683-201ENSMUST00000209088 484 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Gm6068-201ENSMUST00000222270 387 ntBASIC6.4□□□□□ -1.38
Cxcl12P40224 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms