Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Gm8607-201ENSMUST00000221864 431 ntBASIC6.39□□□□□ -1.39
RxraP28700 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.39□□□□□ -1.39
RxraP28700 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RxraP28700 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RxraP28700 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RxraP28700 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RxraP28700 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RxraP28700 Gm10540-201ENSMUST00000097581 276 ntBASIC6.39□□□□□ -1.39
RxraP28700 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
RxraP28700 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.39□□□□□ -1.39
RxraP28700 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RxraP28700 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RxraP28700 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RxraP28700 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.39□□□□□ -1.39
RxraP28700 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
RxraP28700 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RxraP28700 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
RxraP28700 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RxraP28700 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.38□□□□□ -1.39
RxraP28700 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Gm45520-201ENSMUST00000210109 2031 ntBASIC6.38□□□□□ -1.39
RxraP28700 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.38□□□□□ -1.39
RxraP28700 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.38□□□□□ -1.39
RxraP28700 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Gm22710-201ENSMUST00000116892 125 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm12677-201ENSMUST00000118668 426 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm2199-201ENSMUST00000119065 874 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm4910-201ENSMUST00000119605 366 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm16511-201ENSMUST00000120019 564 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm12654-201ENSMUST00000120387 587 ntBASIC6.38□□□□□ -1.39
RxraP28700 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm15750-201ENSMUST00000120970 616 ntBASIC6.38□□□□□ -1.39
RxraP28700 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.38□□□□□ -1.39
RxraP28700 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.38□□□□□ -1.39
RxraP28700 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.38□□□□□ -1.39
RxraP28700 Gm22600-201ENSMUST00000157598 269 ntBASIC6.38□□□□□ -1.39
RxraP28700 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
RxraP28700 Gm28871-201ENSMUST00000186191 687 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Gm37376-201ENSMUST00000192176 453 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RxraP28700 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.38□□□□□ -1.39
RxraP28700 Trdv3-201ENSMUST00000198551 309 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm8479-201ENSMUST00000203825 718 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.38□□□□□ -1.39
RxraP28700 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.38□□□□□ -1.39
RxraP28700 Gm20074-201ENSMUST00000208144 484 ntBASIC6.38□□□□□ -1.39
RxraP28700 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.38□□□□□ -1.39
RxraP28700 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.38□□□□□ -1.39
RxraP28700 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RxraP28700 Desi2-202ENSMUST00000069568 1193 ntBASIC6.38□□□□□ -1.39
RxraP28700 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RxraP28700 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RxraP28700 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RxraP28700 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RxraP28700 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.38□□□□□ -1.39
RxraP28700 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RxraP28700 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.38□□□□□ -1.39
RxraP28700 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
RxraP28700 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RxraP28700 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
RxraP28700 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RxraP28700 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RxraP28700 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RxraP28700 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RxraP28700 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RxraP28700 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.37□□□□□ -1.39
RxraP28700 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.37□□□□□ -1.39
RxraP28700 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.37□□□□□ -1.39
RxraP28700 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RxraP28700 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RxraP28700 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RxraP28700 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC6.37□□□□□ -1.39
RxraP28700 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.37□□□□□ -1.39
RxraP28700 Gm24989-201ENSMUST00000104461 88 ntBASIC6.37□□□□□ -1.39
RxraP28700 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RxraP28700 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RxraP28700 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.37□□□□□ -1.39
RxraP28700 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.37□□□□□ -1.39
RxraP28700 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RxraP28700 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.37□□□□□ -1.39
RxraP28700 Gm23674-201ENSMUST00000157473 131 ntBASIC6.37□□□□□ -1.39
RxraP28700 Gm26037-201ENSMUST00000158150 311 ntBASIC6.37□□□□□ -1.39
RxraP28700 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RxraP28700 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RxraP28700 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RxraP28700 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms