Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lire1P11260 Gm9800-201ENSMUST00000052615 336 ntBASIC6.22□□□□□ -1.41
Lire1P11260 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.22□□□□□ -1.41
Lire1P11260 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.22□□□□□ -1.41
Lire1P11260 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Lire1P11260 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Lire1P11260 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Lire1P11260 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lire1P11260 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lire1P11260 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Lire1P11260 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Lire1P11260 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Lire1P11260 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.22□□□□□ -1.41
Lire1P11260 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.22□□□□□ -1.41
Lire1P11260 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Lire1P11260 Gm42992-201ENSMUST00000197043 6836 ntBASIC6.22□□□□□ -1.41
Lire1P11260 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.21□□□□□ -1.41
Lire1P11260 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Lire1P11260 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.21□□□□□ -1.41
Lire1P11260 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Lire1P11260 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.21□□□□□ -1.42
Lire1P11260 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Gm43317-201ENSMUST00000197924 2544 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Lire1P11260 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Lire1P11260 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.21□□□□□ -1.42
Lire1P11260 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Lire1P11260 Gm24519-201ENSMUST00000104507 132 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Lire1P11260 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Lire1P11260 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.21□□□□□ -1.42
Lire1P11260 Gm15310-201ENSMUST00000117891 372 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Gm13754-201ENSMUST00000120486 998 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.21□□□□□ -1.42
Lire1P11260 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.21□□□□□ -1.42
Lire1P11260 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Gm23740-201ENSMUST00000157385 100 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Gm23276-201ENSMUST00000157913 138 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Gm22728-201ENSMUST00000158087 129 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC6.21□□□□□ -1.42
Lire1P11260 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Gm17152-201ENSMUST00000172430 535 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.21□□□□□ -1.42
Lire1P11260 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.21□□□□□ -1.42
Lire1P11260 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
Lire1P11260 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC6.21□□□□□ -1.42
Lire1P11260 Gm43656-201ENSMUST00000197882 434 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Gm43725-201ENSMUST00000200122 369 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.21□□□□□ -1.42
Lire1P11260 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.21□□□□□ -1.42
Lire1P11260 Gm2221-201ENSMUST00000209342 418 ntBASIC6.21□□□□□ -1.42
Lire1P11260 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.21□□□□□ -1.42
Lire1P11260 AC156576.2-202ENSMUST00000222525 411 ntBASIC6.21□□□□□ -1.42
Lire1P11260 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Mir106b-201ENSMUST00000083580 82 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Lire1P11260 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Lire1P11260 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
Lire1P11260 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Lire1P11260 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.21□□□□□ -1.42
Lire1P11260 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Lire1P11260 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.21□□□□□ -1.42
Lire1P11260 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Lire1P11260 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Lire1P11260 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Lire1P11260 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Lire1P11260 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Lire1P11260 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.2□□□□□ -1.42
Lire1P11260 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms