Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm6215-201ENSMUST00000119297 1386 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm7905-201ENSMUST00000119933 1386 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm6207-201ENSMUST00000120075 1386 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm6228-201ENSMUST00000178856 1386 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm6221-201ENSMUST00000180064 1386 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm17137-201ENSMUST00000164106 4371 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm26014-201ENSMUST00000104405 132 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Btnl10-203ENSMUST00000108818 1028 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Hoxd3P09027 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm12838-201ENSMUST00000116278 325 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm13750-201ENSMUST00000117621 465 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm14036-201ENSMUST00000118248 480 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm12098-201ENSMUST00000118277 508 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm12876-201ENSMUST00000120975 408 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm13726-201ENSMUST00000121278 794 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm12321-201ENSMUST00000121485 804 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 BC002163-201ENSMUST00000121906 319 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm13738-201ENSMUST00000122437 469 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm26256-201ENSMUST00000122499 186 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm6689-201ENSMUST00000130905 481 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm16290-201ENSMUST00000161175 474 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm17047-201ENSMUST00000167709 430 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm24369-201ENSMUST00000175387 96 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Mir7011-201ENSMUST00000183768 73 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm37996-201ENSMUST00000191859 367 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Ighv1-38-201ENSMUST00000192755 349 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm17530-201ENSMUST00000194336 472 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Mir7230-201ENSMUST00000195977 56 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Mir1897-202ENSMUST00000198006 79 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 AC137678.1-201ENSMUST00000198370 118 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm44468-201ENSMUST00000199516 105 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm43513-201ENSMUST00000199779 1076 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Btnl10-201ENSMUST00000020792 1028 ntTSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm45690-201ENSMUST00000210775 246 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm45530-201ENSMUST00000211658 225 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hoxd3P09027 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm7204-201ENSMUST00000062591 600 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Mir421-201ENSMUST00000083575 76 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm44802-201ENSMUST00000208026 1916 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hoxd3P09027 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Hoxd3P09027 Ephx2-202ENSMUST00000224698 1985 ntBASIC6.2□□□□□ -1.42
Hoxd3P09027 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms