Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H2afb3S4R1G7 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
H2afb3S4R1G7 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
H2afb3S4R1G7 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
H2afb3S4R1G7 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H2afb3S4R1G7 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
H2afb3S4R1G7 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm24173-201ENSMUST00000104130 128 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm22710-201ENSMUST00000116892 125 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm13141-201ENSMUST00000117417 456 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm13604-201ENSMUST00000119332 482 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm15316-201ENSMUST00000121082 421 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm15586-201ENSMUST00000121218 528 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm23077-201ENSMUST00000157854 116 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm23071-201ENSMUST00000158242 115 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm2976-201ENSMUST00000160362 513 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm22702-201ENSMUST00000175372 69 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm22990-201ENSMUST00000175427 89 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm27360-201ENSMUST00000183487 80 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Mir6348-201ENSMUST00000183804 120 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm5334-201ENSMUST00000187472 720 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm28846-201ENSMUST00000189161 368 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm28766-201ENSMUST00000191086 234 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm37103-201ENSMUST00000191830 115 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm37708-201ENSMUST00000192337 895 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm46191-201ENSMUST00000218899 433 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 AC102352.1-201ENSMUST00000224187 582 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 AC132260.1-201ENSMUST00000225499 734 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 AC106830.2-201ENSMUST00000226624 943 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 AC116319.2-201ENSMUST00000228159 984 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Mir106b-201ENSMUST00000083580 82 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm23102-201ENSMUST00000083724 116 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
H2afb3S4R1G7 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
H2afb3S4R1G7 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
H2afb3S4R1G7 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
H2afb3S4R1G7 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms