Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Mir674-201ENSMUST00000102421 100 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm13991-201ENSMUST00000120190 648 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm12804-201ENSMUST00000121030 999 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm14728-201ENSMUST00000122196 492 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm24382-201ENSMUST00000122698 107 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm27037-201ENSMUST00000182270 960 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Mir7082-201ENSMUST00000183526 92 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Mir6241-201ENSMUST00000184225 103 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm37770-201ENSMUST00000192855 772 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm37319-201ENSMUST00000193500 636 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm42782-201ENSMUST00000197286 522 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm42776-201ENSMUST00000198031 406 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm44162-201ENSMUST00000203543 544 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm9357-201ENSMUST00000207138 805 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm24621-201ENSMUST00000082679 140 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.24□□□□□ -1.41
Rnf4Q9QZS2 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm25757-201ENSMUST00000103986 123 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm24989-201ENSMUST00000104461 88 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm8855-201ENSMUST00000118888 878 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm14614-201ENSMUST00000119873 384 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm14747-201ENSMUST00000149888 984 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Mir1945-201ENSMUST00000157919 78 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm26037-201ENSMUST00000158150 311 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm38217-201ENSMUST00000194358 910 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm43396-201ENSMUST00000197506 706 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm8539-201ENSMUST00000199822 501 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.23□□□□□ -1.41
Rnf4Q9QZS2 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms