Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Gm5446-201ENSMUST00000091762 784 ntBASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ube3bQ9ES34 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm37356-201ENSMUST00000193362 1613 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm22671-201ENSMUST00000104420 134 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm11843-201ENSMUST00000118984 425 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm13785-201ENSMUST00000119099 690 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm12903-201ENSMUST00000121015 544 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm3160-201ENSMUST00000128343 607 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm8032-201ENSMUST00000171009 574 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 n-R5s93-201ENSMUST00000180091 119 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm21392-201ENSMUST00000182950 972 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm6931-201ENSMUST00000183103 371 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm43555-201ENSMUST00000196588 310 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm44471-201ENSMUST00000197963 100 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm44147-201ENSMUST00000204658 94 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 AC158521.1-202ENSMUST00000224352 645 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 AC121137.1-201ENSMUST00000225272 602 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 AC158521.1-201ENSMUST00000225295 660 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm6166-201ENSMUST00000098689 409 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 AC155298.3-201ENSMUST00000225307 3220 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm12608-201ENSMUST00000122013 1715 ntBASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Ube3bQ9ES34 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 AC124572.1-201ENSMUST00000218155 2406 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 AC154511.1-201ENSMUST00000222578 1587 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Prkaa1-202ENSMUST00000228218 4618 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm13310-201ENSMUST00000120962 1381 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm12635-201ENSMUST00000117285 752 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm8662-201ENSMUST00000118644 574 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm11257-201ENSMUST00000121313 315 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm7309-201ENSMUST00000121670 581 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm11962-201ENSMUST00000145746 255 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm26323-201ENSMUST00000157743 175 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm22101-201ENSMUST00000157928 103 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm21909-201ENSMUST00000178260 439 ntBASIC8.65□□□□□ -1.02
Ube3bQ9ES34 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Ube3bQ9ES34 Gm18185-201ENSMUST00000186725 667 ntBASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms