Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC170086.2-201ENSMUST00000224733 803 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 AC122251.2-201ENSMUST00000227341 603 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm25342-201ENSMUST00000157459 122 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm25219-201ENSMUST00000157545 330 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm24435-201ENSMUST00000157886 110 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm26211-201ENSMUST00000158578 129 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm29650-201ENSMUST00000188485 742 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm3351-201ENSMUST00000193454 505 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm38291-201ENSMUST00000193671 259 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm43157-201ENSMUST00000198223 412 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Olfr519-201ENSMUST00000084752 960 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Cdc40Q9DC48 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm22103-201ENSMUST00000116733 121 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm26475-201ENSMUST00000116769 121 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm23620-201ENSMUST00000116812 121 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm25042-201ENSMUST00000116856 121 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm25540-201ENSMUST00000116880 121 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm14659-201ENSMUST00000117667 843 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm15715-201ENSMUST00000118032 283 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm12189-201ENSMUST00000119779 912 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm22276-201ENSMUST00000122469 129 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm26346-201ENSMUST00000157525 329 ntBASIC5.8□□□□□ -1.48
Cdc40Q9DC48 Gm26162-201ENSMUST00000157793 132 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms