Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm11965-201ENSMUST00000122017 277 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm24002-201ENSMUST00000158456 104 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm9064-201ENSMUST00000163579 566 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm19200-201ENSMUST00000182579 1001 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Mir6908-201ENSMUST00000184056 63 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm29513-201ENSMUST00000185741 202 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm28586-201ENSMUST00000189857 456 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm37376-201ENSMUST00000192176 453 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm37526-201ENSMUST00000194640 619 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm29745-201ENSMUST00000198005 687 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm19182-201ENSMUST00000207139 577 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Diaph3-206ENSMUST00000226745 713 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Thap6-201ENSMUST00000191860 3151 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ddx56Q9D0R4 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Mir678-201ENSMUST00000102114 84 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm11833-201ENSMUST00000118393 853 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm14614-201ENSMUST00000119873 384 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm14229-201ENSMUST00000121178 850 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Llph-ps1-201ENSMUST00000121281 390 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm2959-201ENSMUST00000169844 621 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm27266-201ENSMUST00000184521 123 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm28745-201ENSMUST00000190069 305 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm17895-201ENSMUST00000194028 874 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm37215-201ENSMUST00000194927 1259 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm43383-201ENSMUST00000195981 469 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm18040-201ENSMUST00000217922 827 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 AC154510.1-201ENSMUST00000223925 737 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm23623-201ENSMUST00000082461 107 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Ddx56Q9D0R4 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 121.4 ms