Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm15621-201ENSMUST00000119162 364 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm4910-201ENSMUST00000119605 366 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm12849-201ENSMUST00000120013 739 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm11609-201ENSMUST00000121926 793 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm22820-201ENSMUST00000157205 329 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm24735-201ENSMUST00000158859 118 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm26509-201ENSMUST00000180947 948 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm18342-201ENSMUST00000186987 694 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm2427-201ENSMUST00000189121 881 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Msh4Q99MT2 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.19□□□□□ -1.42
Msh4Q99MT2 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
Msh4Q99MT2 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm2986-201ENSMUST00000121603 382 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm6067-201ENSMUST00000121648 491 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm23071-201ENSMUST00000158242 115 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm3344-201ENSMUST00000169610 603 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm4831-201ENSMUST00000174626 594 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm22698-201ENSMUST00000175375 108 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm44265-201ENSMUST00000203631 465 ntBASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Msh4Q99MT2 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.18□□□□□ -1.42
Msh4Q99MT2 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms