Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm25277-201ENSMUST00000157266 324 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm24363-201ENSMUST00000158440 311 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm29214-201ENSMUST00000190216 570 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm4585-201ENSMUST00000207218 452 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm7769-201ENSMUST00000212900 933 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm34165-201ENSMUST00000222012 1174 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 AC154323.2-201ENSMUST00000226557 1151 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Olfr687-201ENSMUST00000098154 938 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 AC122355.1-201ENSMUST00000228155 4184 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 AC162908.1-201ENSMUST00000219164 4563 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm29438-201ENSMUST00000191298 2613 ntBASIC4.9□□□□□ -1.63
Nup35Q8R4R6 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nup35Q8R4R6 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm43328-201ENSMUST00000198544 1434 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 AC151904.1-201ENSMUST00000219945 1498 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm12174-201ENSMUST00000119853 813 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm15801-201ENSMUST00000120920 522 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm15696-201ENSMUST00000121730 445 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm23674-201ENSMUST00000157473 131 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm23077-201ENSMUST00000157854 116 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm23222-201ENSMUST00000158117 76 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm26211-201ENSMUST00000158578 129 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm8783-201ENSMUST00000159764 522 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm6541-201ENSMUST00000165542 561 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm24103-201ENSMUST00000174930 77 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Mir5617-201ENSMUST00000176786 57 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm5334-201ENSMUST00000187472 720 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm28973-201ENSMUST00000189310 613 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm37265-201ENSMUST00000191698 885 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm29784-201ENSMUST00000196217 406 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm42558-201ENSMUST00000200982 265 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm45127-201ENSMUST00000205984 1015 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm6702-201ENSMUST00000208496 471 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC4.89□□□□□ -1.63
Nup35Q8R4R6 AC131117.2-202ENSMUST00000224539 547 ntBASIC4.89□□□□□ -1.63
Nup35Q8R4R6 AC161275.1-201ENSMUST00000224668 208 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms