Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Ccdc38Q8CDN8 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm23979-201ENSMUST00000104071 128 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm25785-201ENSMUST00000104129 125 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm23674-201ENSMUST00000157473 131 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm6434-201ENSMUST00000163316 372 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm27185-201ENSMUST00000184296 247 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm27601-201ENSMUST00000184794 127 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm7626-201ENSMUST00000195801 353 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm19088-201ENSMUST00000198800 566 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm44487-201ENSMUST00000205145 325 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm24695-201ENSMUST00000083877 83 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm10205-201ENSMUST00000087431 234 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Robo2-210ENSMUST00000226478 8059 ntBASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc38Q8CDN8 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm14173-201ENSMUST00000117690 278 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm7212-201ENSMUST00000120817 348 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Mir1903-201ENSMUST00000122574 80 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm8869-201ENSMUST00000195222 947 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm43561-201ENSMUST00000199866 448 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm44252-201ENSMUST00000204187 330 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm6070-201ENSMUST00000207275 419 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.95□□□□□ -1.3
Ccdc38Q8CDN8 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Gm25415-201ENSMUST00000104220 132 ntBASIC6.94□□□□□ -1.3
Ccdc38Q8CDN8 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms