Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 AC110043.1-201ENSMUST00000220278 1627 ntBASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Gm8412-201ENSMUST00000077493 440 ntBASIC7.17□□□□□ -1.26
Nup98Q6PFD9 n-R5s204-201ENSMUST00000082972 119 ntBASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Gm15425-201ENSMUST00000119013 2711 ntBASIC7.17□□□□□ -1.26
Nup98Q6PFD9 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 CT009757.5-201ENSMUST00000221858 3425 ntBASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Gm28066-201ENSMUST00000188657 472 ntBASIC7.16□□□□□ -1.26
Nup98Q6PFD9 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Gm44316-201ENSMUST00000199274 97 ntBASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Nup98Q6PFD9 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm14606-201ENSMUST00000117078 1155 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm3943-201ENSMUST00000118606 718 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm11737-201ENSMUST00000118713 468 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm14521-201ENSMUST00000119545 350 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm14515-201ENSMUST00000121327 216 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm23954-201ENSMUST00000157213 353 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm26106-201ENSMUST00000157254 228 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm22132-201ENSMUST00000175316 100 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm7832-201ENSMUST00000202613 880 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm33242-201ENSMUST00000212130 1057 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 AC112956.1-201ENSMUST00000213563 492 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm19174-201ENSMUST00000216944 956 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm37686-201ENSMUST00000194099 2309 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm8401-201ENSMUST00000120248 1739 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Gm37738-201ENSMUST00000192396 4716 ntBASIC7.15□□□□□ -1.26
Nup98Q6PFD9 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Nup98Q6PFD9 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Nup98Q6PFD9 Gm8424-201ENSMUST00000117716 988 ntBASIC7.15□□□□□ -1.27
Nup98Q6PFD9 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC7.15□□□□□ -1.27
Nup98Q6PFD9 Gm13430-201ENSMUST00000121366 288 ntBASIC7.15□□□□□ -1.27
Nup98Q6PFD9 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Nup98Q6PFD9 Mir1970-201ENSMUST00000157839 104 ntBASIC7.15□□□□□ -1.27
Nup98Q6PFD9 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC7.15□□□□□ -1.27
Nup98Q6PFD9 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Nup98Q6PFD9 Gm19231-201ENSMUST00000193212 830 ntBASIC7.15□□□□□ -1.27
Nup98Q6PFD9 AC091783.2-201ENSMUST00000224626 740 ntBASIC7.15□□□□□ -1.27
Nup98Q6PFD9 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Nup98Q6PFD9 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Nup98Q6PFD9 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Nup98Q6PFD9 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms