Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm11271-201ENSMUST00000116054 440 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm2199-201ENSMUST00000119065 874 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm15349-201ENSMUST00000121154 204 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm11257-201ENSMUST00000121313 315 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm22262-201ENSMUST00000158713 86 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm18560-201ENSMUST00000173463 1123 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm24756-201ENSMUST00000177002 96 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm8241-201ENSMUST00000189286 816 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm36965-201ENSMUST00000193797 394 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm17965-201ENSMUST00000193904 517 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm38334-201ENSMUST00000195060 313 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm20223-201ENSMUST00000199932 805 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm31532-201ENSMUST00000203555 767 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm45734-201ENSMUST00000211916 411 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 AC153153.2-201ENSMUST00000223572 411 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 AC112972.1-201ENSMUST00000227329 365 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 AC118250.1-201ENSMUST00000228569 875 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm13058-201ENSMUST00000117097 1435 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.59□□□□□ -1.03
Usp48Q3V0C5 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm42930-201ENSMUST00000200872 3260 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm12598-201ENSMUST00000117333 830 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm15110-201ENSMUST00000117545 881 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm14945-201ENSMUST00000119556 1118 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm5255-201ENSMUST00000120125 642 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm14712-201ENSMUST00000120195 772 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm11575-201ENSMUST00000122243 228 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm22555-201ENSMUST00000157801 62 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm4152-201ENSMUST00000172675 259 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm22990-201ENSMUST00000175427 89 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm27653-201ENSMUST00000185037 136 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28739-201ENSMUST00000185415 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28219-201ENSMUST00000185452 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28542-201ENSMUST00000185545 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28303-201ENSMUST00000185642 747 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm29244-201ENSMUST00000185825 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm29437-201ENSMUST00000185865 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm29412-201ENSMUST00000185869 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28910-201ENSMUST00000185921 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28812-201ENSMUST00000185963 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm29468-201ENSMUST00000185978 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28871-201ENSMUST00000186191 687 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28854-201ENSMUST00000186218 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28636-201ENSMUST00000186353 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28452-201ENSMUST00000186623 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm29298-201ENSMUST00000186704 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28185-201ENSMUST00000186815 694 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28227-201ENSMUST00000186862 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28796-201ENSMUST00000186905 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm29659-201ENSMUST00000187063 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28473-201ENSMUST00000187325 696 ntBASIC8.58□□□□□ -1.04
Usp48Q3V0C5 Gm28682-201ENSMUST00000187430 696 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms