Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trafd1Q3UDK1 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm12442-201ENSMUST00000118372 338 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm13818-201ENSMUST00000119441 511 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm14375-201ENSMUST00000119490 855 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm14998-201ENSMUST00000120502 495 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm24383-201ENSMUST00000122691 333 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm23343-201ENSMUST00000158964 143 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 AC073947.1-201ENSMUST00000216991 649 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Mir3068-201ENSMUST00000083004 136 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Olfr687-201ENSMUST00000098154 938 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.14□□□□□ -1.43
Trafd1Q3UDK1 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Mir680-1-201ENSMUST00000102257 109 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Gm12565-201ENSMUST00000119004 649 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Gm23430-201ENSMUST00000122490 314 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Gm11107-201ENSMUST00000165414 505 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trafd1Q3UDK1 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms