Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
Col8a1Q00780 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.02□□□□□ -1.45
Col8a1Q00780 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Col8a1Q00780 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm44624-201ENSMUST00000208700 2278 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm26067-201ENSMUST00000103789 110 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm14729-201ENSMUST00000118373 689 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm5319-201ENSMUST00000118965 873 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm9208-201ENSMUST00000120468 948 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm23111-201ENSMUST00000122652 105 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm2709-201ENSMUST00000142979 350 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm24854-201ENSMUST00000158025 98 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm24724-201ENSMUST00000158230 107 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm5260-201ENSMUST00000186157 949 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm18181-201ENSMUST00000190670 736 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm18699-201ENSMUST00000190713 243 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm9504-201ENSMUST00000196322 468 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm44221-201ENSMUST00000203552 388 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm19596-201ENSMUST00000203685 739 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm8035-201ENSMUST00000204625 687 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm3257-201ENSMUST00000207217 675 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gnrh1-202ENSMUST00000223929 428 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Col8a1Q00780 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm44996-201ENSMUST00000208787 2980 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Col8a1Q00780 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.01□□□□□ -1.45
Col8a1Q00780 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Col8a1Q00780 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Col8a1Q00780 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms