Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm35323-201ENSMUST00000191836 499 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm2287-201ENSMUST00000197417 1084 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm36371-201ENSMUST00000209043 1103 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm2975-201ENSMUST00000209710 820 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Hmgb1P63158 AC101205.1-201ENSMUST00000227916 907 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Mir455-201ENSMUST00000093594 82 ntBASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Hmgb1P63158 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Hmgb1P63158 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hmgb1P63158 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hmgb1P63158 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hmgb1P63158 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm25546-201ENSMUST00000103977 132 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm8475-201ENSMUST00000118211 526 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm15007-201ENSMUST00000119982 710 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm15019-201ENSMUST00000120148 434 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm13754-201ENSMUST00000120486 998 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm13508-201ENSMUST00000121639 775 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm11200-201ENSMUST00000121698 448 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC7.34□□□□□ -1.23
Hmgb1P63158 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm24781-201ENSMUST00000157636 117 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.34□□□□□ -1.23
Hmgb1P63158 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm22569-201ENSMUST00000175545 124 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm18415-201ENSMUST00000177464 647 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm27152-201ENSMUST00000183828 99 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm9320-201ENSMUST00000184151 473 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm27970-201ENSMUST00000184854 407 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm43141-201ENSMUST00000199695 274 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Hmgb1P63158 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm25189-201ENSMUST00000083911 164 ntBASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hmgb1P63158 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hmgb1P63158 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Hmgb1P63158 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Hmgb1P63158 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC7.34□□□□□ -1.24
Hmgb1P63158 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Hmgb1P63158 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Hmgb1P63158 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Gm43190-201ENSMUST00000187850 1779 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 AC159624.1-201ENSMUST00000217762 1344 ntBASIC7.33□□□□□ -1.24
Hmgb1P63158 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
Hmgb1P63158 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Hmgb1P63158 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms