Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sf3b6P59708 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.33□□□□□ -1.4
Sf3b6P59708 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sf3b6P59708 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.33□□□□□ -1.4
Sf3b6P59708 Gm42534-201ENSMUST00000196063 1754 ntBASIC6.33□□□□□ -1.4
Sf3b6P59708 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sf3b6P59708 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sf3b6P59708 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sf3b6P59708 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Sf3b6P59708 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sf3b6P59708 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC6.33□□□□□ -1.4
Sf3b6P59708 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sf3b6P59708 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sf3b6P59708 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sf3b6P59708 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Sf3b6P59708 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.33□□□□□ -1.4
Sf3b6P59708 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sf3b6P59708 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.33□□□□□ -1.4
Sf3b6P59708 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sf3b6P59708 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Sf3b6P59708 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
Sf3b6P59708 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Sf3b6P59708 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sf3b6P59708 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm15203-201ENSMUST00000117668 455 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm14751-201ENSMUST00000117693 222 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm13788-201ENSMUST00000120767 601 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm15388-201ENSMUST00000121578 726 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm24517-201ENSMUST00000122560 107 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm23657-201ENSMUST00000122623 294 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC6.32□□□□□ -1.4
Sf3b6P59708 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm7152-201ENSMUST00000163570 605 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm29281-201ENSMUST00000188077 381 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm43659-201ENSMUST00000200894 628 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm44943-201ENSMUST00000207254 300 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC6.32□□□□□ -1.4
Sf3b6P59708 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm9289-201ENSMUST00000221269 606 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 AC163041.1-201ENSMUST00000221984 133 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 AC154506.3-201ENSMUST00000225417 213 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 AC117814.1-201ENSMUST00000226135 352 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 CT009556.3-201ENSMUST00000226173 513 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm37169-201ENSMUST00000195599 4161 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm7754-201ENSMUST00000223075 2064 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Sf3b6P59708 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Sf3b6P59708 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.32□□□□□ -1.4
Sf3b6P59708 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sf3b6P59708 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
Sf3b6P59708 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sf3b6P59708 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Sf3b6P59708 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sf3b6P59708 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Sf3b6P59708 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Sf3b6P59708 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.31□□□□□ -1.4
Sf3b6P59708 AC122357.1-201ENSMUST00000221652 1515 ntBASIC6.31□□□□□ -1.4
Sf3b6P59708 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Sf3b6P59708 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms